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Job DescriptionP37681
Confidence98.68%DateThu Jan 5 11:56:55 GMT 2012
Rank1Aligned Residues166
% Identity13%Templatec2k0lA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110....... ..120........ .130.......
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Query Sequence  QSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHE. RWGTVKASAAA. . . . . . . . . . . DVLDNSNGW
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Template Sequence  KDNTWYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGYQVNPYLGFEMGYDWLGRMAYKGSVDNGAFKAQGV
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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  VGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGY
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Template Sequence  QLTAKLGYPIT. DDLDIYTRLGGMVWRADSKGNYAS. . . . . . . . TGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQW
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   95....100..... ....110.........120......... 130.........140.........150.........160.....
 
   218.220.........230.........240......
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Query Sequence  SELPEEITDSPMIDRNESFTFVTGVSWRF
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Template Sequence  VNNIGDAGTVGTRPDNGMLS. . LGVSYRF
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   166...170.........180..... ....190..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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