|   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
R | D | S | T | A | M | A | G | V | A | W | Y | H | H | E | R | W | G | . |
. |
. |
. |
. |
. |
. |
T | V | K | A | S | A | A | A | D | V | L | D | N | S | N | G | W | V | G | . |
. |
. |
. |
E | L | S | V | F | H | K | M | Q | I | G | R | L | S | L | T | P | A | L | G | V | L | Y | Y | D | E | N | F | S | . |
. |
. |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
| . | . |
|
|
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|
|
|
|
Template Sequence |   |
R | E | T | N | Y | E | P | Q | L | F | L | G | F | A | T | D | Y | R | F | A | G | W | T | L | R | D | V | E | M | G | Y | N | H | D | . |
. |
N | G | R | S | D | P | T | S | R | S | W | N | R | L | Y | T | R | L | M | A | E | N | G | N | W | L | V | E | V | K | P | W | Y | V | V | G | N | T | D | D | N | P | D | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
| T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | S | T | T |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | Y | Y | Y | G | I | S | E | S | E | S | R | R | S | G | L | A | S | Y | S | A | Q | D | A | W | V | P | Y | V | S | L | T | A | K | Y | P | I | G | E | H | V | V | L | M | A | S | A | G | Y | S | E | L | P | E | E | I | T | D | S | P | M | I | D | R | N | E | S | F | T | F | V |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   | . | . | . |   |
|
|
|
|
|   |   |
|
|
|
|   |   |   |
| . | . | . | . | . |   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|
Template Sequence |   |
T | K | Y | M | G | Y | Y | Q | L | K | I | G | Y | H | L | G | D | A | V | L | S | A | K | G | Q | Y | N | W | N | T | G | . |
. |
. |
Y | G | G | A | E | L | G | L | S | Y | P | I | T | K | H | V | . |
. |
. |
. |
. |
R | L | Y | T | Q | V | Y | S | G | Y | G | E | S | L | I | D | Y | N | F | N | Q | T | R | V | G |
Template Known Secondary structure |   |
 |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T | T | . | . | . |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
| . | . | . | . | . |  |  |  |  |  |  |  |  |  | S |
| S | S | S | T | T | T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
  |
  |   |
240 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
T | G | V | S |
Query Conservation |   |
  |
|   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|   |
Template Sequence |   |
V | G | V | M |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
261 | . | . | . |
  |