Return to main results Retrieve Phyre Job Id

Job DescriptionQ2EET2
Confidence1.27%DateThu Jan 5 12:33:53 GMT 2012
Rank79Aligned Residues12
% Identity33%Templatec1cl4A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:protein (gag polyprotein); PDBTitle: nucleocapsid protein from mason-pfizer monkey virus (mpmv)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.....
Predicted Secondary structure 








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Query Sequence  KFLANKPELPPH
Query Conservation   





 



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Template Conservation 
    
 

 
 
Template Sequence  KTDNQGNPIPPH
Template Known Secondary structure  TTSSSS


S

Template Predicted Secondary structure 








Template SS confidence 











   6970.........80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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