Job Description P39362 Confidence 98.38% Date Thu Jan 5 11:59:53 GMT 2012 Rank 161 Aligned Residues 132 % Identity 14% Template d2btma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	H	A	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	.	.	.	.	.	.	.	.	.	.	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	.	.	.	.
Query Conservation																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		P	V	M	L	K	D	L	G	V	T	Y	V	I	L	G	H	S	E	R	R	Q	M	F	A	E	T	D	E	T	V	N	K	K	V	L	A	A	F	T	R	G	L	I	P	I	I	C	C	G	E	S	L	E	E	R	E	A	G	Q	T	N	A	V	V	A	S	Q	V	E	K	A	L	A	G	L	T	P	E	Q	V
Template Known Secondary structure									T							S								S																		T																T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
					131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																									.							.	.	.	.	.	.	.	.	.																								.
Query SS confidence		.	.	.																									.							.	.	.	.	.	.	.	.	.																								.
Query Sequence		.	.	.	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	.	Q	K	V	R	T	A	.	.	.	.	.	.	.	.	.	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	.	G	A	Q	H	M	V	I	G	R	A	L	F	S
Query Conservation		.	.	.																									.							.	.	.	.	.	.	.	.	.																								.
Alig confidence		.	.	.																									.							.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		K	Q	A	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	S	S	T	P	E	D	A	N	S	V	C	G	H	I	R	S	V	V	S	R	L	F	G	P	E	A	A	E	A	I	R	I	Q	Y	G	G	S	V	K	P	D	N	I	R	D	F	L	A	Q	Q	Q	I	D	G	A	L	V	G	G	A	S	L	E
Template Known Secondary structure		T	T								G	G	G	T	T	T	S																													T	T	S						S	S			T	T	T						T	S	T	T							S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	Y	R	A	T	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	S	F	L	Q	L	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions