Job Description P39362 Confidence 98.73% Date Thu Jan 5 11:59:53 GMT 2012 Rank 122 Aligned Residues 205 % Identity 15% Template d2b4ga1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.95

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	L	H	P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		F	M	N	A	A	G	V	L	C	T	T	E	.	.	.	.	E	D	L	R	R	M	T	E	S	E	S	G	S	L	I	G	K	S	C	T	L	A	P	R	T	G	N	P	E	P	R	Y	F	G	L	P	L	G	S	I	N	S	M	G	L	P	N	L	G	V	D	F	Y	L	S	Y	A	A	Q	T	H	D	Y	S
Template Known Secondary structure						T	T	S	S		S	S		.	.	.	.									S	S		S									S	S		B			S		S							T	T										B	S												T			T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.													.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	.	.	.	.	.	.	I	R	P	A	W	I	F	V	H	A	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	P	S	E	T	L	T	E	I	R	H	.	T	G	A	R	A	G	L	V	F	N	P	A	T	P
Query Conservation																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		R	K	P	L	F	L	S	M	S	G	L	S	V	E	E	S	V	E	M	V	K	K	L	V	P	I	T	K	E	K	G	T	I	L	E	L	N	L	S	C	P	N	V	P	G	K	P	Q	V	G	Y	D	F	D	T	T	R	T	Y	L	Q	K	V	S	E	A	Y	G	L	P	F	G	V	K	M	P	P	Y	F	D
Template Known Secondary structure		T										S	S																															S	T	T				G	G	G																		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		119	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.																						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	A	W	R	Y	L	A	S	.	.	.	.	.	.	E	L	D	G	V	M	V	M	T	S	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G
Query Conservation											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	H	F	D	M	A	A	A	V	L	N	D	F	P	L	V	K	F	I	T	C	V	N	S	I	G	N	G	L	V	I	D	P	A	N	E	T	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	K	Y	V	L	P	T	A	L	A	N	V	N	A	F	F	R	R	C	P	D	K	L	V	F	G	C	G	G
Template Known Secondary structure													T	T		T	T																		T	T	T	T			S			G	G	G	G							G	G	G																T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		172		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																										.	.
Query SS confidence			.																										.	.
Query Sequence		I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	.	.	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation			.																										.	.
Alig confidence			.																										.	.
Template Conservation
Template Sequence		V	Y	S	G	E	E	A	F	L	H	I	L	A	G	A	S	M	V	Q	V	G	T	A	L	H	D	E	G	P	I	I	F	A	R	L	N	K	E	L	Q	E
Template Known Secondary structure				S											T							S								T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions