Return to main results Retrieve Phyre Job Id

Job DescriptionP39362
Confidence98.25%DateThu Jan 5 11:59:53 GMT 2012
Rank182Aligned Residues178
% Identity13%Templated1v5xa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GRELTALDNLDFGSLHLDIEDSSFINNIT. . FGMKTVQAVARQTPHPLSFHFMLAR. . PQRWFNALAEIRPAWIFVH. AE
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Template Sequence  LEDALLAEALGAFALGF. . . . . VLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEE
Template Known Secondary structure  T
S.....

TT
TTB

S
SSSSS

TT
S
S

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   11........20....... ..30.........40.........50.........60.........70.........80.....
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  TLDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWADG
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Template Sequence  PPEWAEAV. . . . . GRFYPVIKAFPLEGPAR. PEWADYPAQALLLDG. KRPGSGEAYPRAWAKPLLA. . . . . TGRRVILAG
Template Known Secondary structure 
.....TTTS

SSS

.GGGGGSS
S
.SSTTS




GGGG.....TTS

S
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   86...90... ......100.........110 .........120..... ....130.........140.... .....150...
 
   171........180.........190........ .200.........210
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Query Sequence  GITLAAAQQLAAAGAQHMVIGRALFSSS. . . . . . DYRATLAQFATL
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Template Sequence  GIAPENLEEVLALRPYALDLASGVEEAPGVKSAEKLRALFARLASL
Template Known Secondary structure  S

STT

SSGGGTT
T
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   154.....160.........170.........180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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