Job Description P39362 Confidence 99.91% Date Thu Jan 5 11:59:53 GMT 2012 Rank 28 Aligned Residues 192 % Identity 18% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	L	H	P	S	L	A	S	A	N	P	.	.	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S
Query Conservation														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.													.										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.										.	.	.
Template Sequence		A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	.	Y	A	D	L	L	E	I	G	L	.	.	.	P	Y	S	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E	L	V	R	E	V	R	A	L	T	E	K	P	L	F
Template Known Secondary structure										T	T	S	S													G	G	.	G		S	S						.	.	.																		T	T																			S
Template Predicted Secondary structure																												.										.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		63	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		F	H	F	M	L	A	.	.	.	.	.	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.
Template Conservation
Template Sequence		L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	P	D	L	P	P	D	E	D	P	G	L	V	R	L	A	Q	E	I	G	L	E	T	V	F	L	L	A	P	T	S	T	D	A	R	I	A	T	V	V	R	H	A	T	G	F	V	Y	A	V	S
Template Known Secondary structure																									T							T	T			G	G	G												T									T	T											T	T			S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																								.	.	.	.
Query SS confidence																																					.																								.	.	.	.
Query Sequence		E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	.	.	.	.	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation																																					.																								.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.														.											.									.	.														.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.														.																				.	.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	E	V	K	D	L	V	R	R	I	K	A	R	T	.	A	L	P	V	A	V	G	F	G	V	S	G	K	A	T	A	A	Q	A	.	.	A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	E	G	R	S	L	A	P	L	L	Q	E	I	R	Q
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.											T	T		.		S						S				S								.	.	T	T	S	S														T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.														.																				.	.
Template SS confidence
		176											.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions