Job Description P39362 Confidence 98.22% Date Thu Jan 5 11:59:53 GMT 2012 Rank 186 Aligned Residues 165 % Identity 14% Template d1ttja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																		.																														.				.	.	.	.	.	.	.
Query SS confidence																		.																														.				.	.	.	.	.	.	.
Query Sequence		I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	.	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	H	A	E	.	.	.	.	.	.	.	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F
Query Conservation																		.																														.				.	.	.	.	.	.	.
Alig confidence																		.																														.				.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	S	T	S	S	H	L	A	M	T	K	E	R	L	S	H	P	K	F	V	I	A	A	Q	N	A	G	N	A	D	A	L	A	S	L	K	D	F	G	V	N	W	I	V	L	G	H	S	E	R	R	A	Y	Y	G	E	T	N	E	I	V	A	D	K	V	A	A	A	V	A	S	G	F	M	V	I	A	C	I
Template Known Secondary structure																			T	T						S				S										T	T							S								S																	T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		114	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160										.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																									.							.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																									.							.	.	.	.	.	.	.	.	.
Query Sequence		N	P	A	T	P	I	D	A	.	.	.	.	.	.	.	.	.	.	.	W	R	Y	L	A	S	E	L	D	.	.	.	.	.	.	.	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	.	Q	K	V	R	T	A	.	.	.	.	.	.	.	.	.	F	P	Q	T	E
Query Conservation										.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																									.							.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																									.							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	T	L	Q	E	R	E	S	G	R	T	A	V	V	V	L	T	Q	I	A	A	I	A	K	K	L	K	K	A	D	W	A	K	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	A	H	A	L	I	R	S	W	V	S	S	K	I	G	A	D	V	A	G	E	L	R
Template Known Secondary structure										T	T															T	T			G	G	G	G	G	G								G	G	G	T	T	T	S																							T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	.	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A
Query Conservation																			.
Alig confidence																			.																	.
Template Conservation																																				.
Template Sequence		I	L	Y	G	G	S	V	N	G	K	N	A	R	T	L	Y	Q	Q	R	D	V	N	G	F	L	V	G	G	A	S	L	K	P	E	.	F	V	D	I	I	K	A	T	Q
Template Known Secondary structure						S	S			T	T	T						T	S	T	T							S	G	G	G	G	S	T		.							T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions