Job Description P39362 Confidence 98.09% Date Thu Jan 5 11:59:53 GMT 2012 Rank 206 Aligned Residues 180 % Identity 18% Template d1piia1 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	.	.	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D
Query Conservation																															.	.
Alig confidence																			.	.	.	.	.								.	.
Template Conservation																			.	.	.	.	.
Template Sequence		G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	.	.	.	.	.	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	R	N	H	D	I	A	D	V	V	D	K	A	K	V	L	S	L	A	A	V	Q	L	H	G	N	E	E	Q
Template Known Secondary structure												T		S					.	.	.	.	.				T	T		T	T	B																						S	S														T		S						S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T
Query Conservation
Alig confidence																														.	.														.															.	.	.	.	.	.	.
Template Conservation																														.	.														.															.	.	.	.	.	.	.
Template Sequence		L	Y	I	D	T	L	R	E	A	L	P	A	H	V	A	I	W	K	A	L	S	V	G	E	T	L	P	A	.	.	R	E	F	Q	H	V	D	K	Y	V	L	D	N	.	G	Q	G	G	S	G	Q	R	F	D	W	S	L	L	.	.	.	.	.	.	.	N	G	Q	S	L	G	N	V	L	L	A	G	G	L	G
Template Known Secondary structure											S		T	T	S									S	S	S				.	.				T	T								S	.		S			S	S					G	G	G	G	.	.	.	.	.	.	.	T	T	S			T	T					S	S
Template Predicted Secondary structure																														.	.														.															.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.								.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	.	.	.	D	Y	R	A	T	L	A	Q	F	A	T	L
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		A	D	N	C	V	E	A	A	Q	T	G	C	A	G	L	D	F	N	S	A	V	E	S	Q	P	G	I	K	D	A	R	L	L	A	S	V	F	Q	T	L
Template Known Secondary structure		T	T	T						T	T			S						G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions