Job Description P39362 Confidence 98.29% Date Thu Jan 5 11:59:53 GMT 2012 Rank 177 Aligned Residues 133 % Identity 11% Template d1neya_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence																.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	H	A	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	.	.	.	.	.	.	.	.	.	.	.	D	A	W	R	Y	L	A	S	E	L	D	.	.	.	.
Query Conservation																.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence																.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		V	D	Q	I	K	D	V	G	A	K	Y	V	I	L	G	H	S	E	R	R	S	Y	F	H	E	D	D	K	F	I	A	D	K	T	K	F	A	L	G	Q	G	V	G	V	I	L	C	I	G	E	T	L	E	E	K	K	A	G	K	T	L	D	V	V	E	R	Q	L	N	A	V	L	E	E	V	K	D	F	T	N
Template Known Secondary structure								T	T							S							T	T																	T	T																T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
			131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																															.	.	.	.	.	.	.	.	.																								.
Query SS confidence		.																															.	.	.	.	.	.	.	.	.																								.
Query Sequence		.	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	.	.	.	.	.	.	.	.	.	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	.	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D
Query Conservation		.																															.	.	.	.	.	.	.	.	.																								.
Alig confidence		.																															.	.	.	.	.	.	.	.	.																								.																.
Template Conservation																																																																																	.
Template Sequence		V	V	V	A	Y	E	P	V	A	I	G	T	G	L	A	A	T	P	E	D	A	Q	D	I	H	A	S	I	R	K	F	L	A	S	K	L	G	D	K	A	A	S	E	L	R	I	L	Y	G	G	S	A	N	G	S	N	A	V	T	F	K	D	K	A	D	V	D	G	F	L	V	G	G	A	S	L	K	P	E	.
Template Known Secondary structure											T	T	T	S																																					S	S			T	T	T	G	G	G	G	T	T		T	T							S	G	G	G	G	S	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	T	L	A	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	D	I	I	N	S	R
Template Known Secondary structure							T	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions