Job Description P39362 Confidence 98.34% Date Thu Jan 5 11:59:53 GMT 2012 Rank 172 Aligned Residues 136 % Identity 12% Template d1m6ja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																.			.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																.			.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	H	A	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	.	.	.	.	.	.	.	.	.	.	.	I	D	A	W	R	Y	L	A	S	E	L	D	G	.	.	.
Query Conservation																.			.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																.			.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		V	G	M	L	V	D	C	Q	V	P	Y	V	I	L	G	H	S	E	R	R	Q	I	F	H	E	S	N	E	Q	V	A	E	K	V	K	V	A	I	D	A	G	L	K	V	I	A	C	I	G	E	T	E	A	Q	R	I	A	N	Q	T	E	E	V	V	A	A	Q	L	K	A	I	N	N	A	I	S	K	E	A	W
Template Known Secondary structure								T	T							S								S																		T																T	T																	S		T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
						132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	.	.	.	.	.	.	.	.	.	.	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	.	A	G	A	Q	H	M	V	I	G	R	A	L	F	S
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		K	N	I	I	L	A	Y	E	P	V	W	A	I	G	T	G	K	T	A	T	P	D	Q	A	Q	E	V	H	Q	Y	I	R	K	W	M	T	E	N	I	S	K	E	V	A	E	A	T	R	I	Q	Y	G	G	S	V	N	P	A	N	C	N	E	L	A	K	K	A	D	I	D	G	F	L	V	G	G	A	S	L	D
Template Known Secondary structure		G	G								G	G	G	S	S	S	S																							T								S						S				T	T	T						T	S	T	T							S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	F	K	T	I	I	N	S	V	S	E
Template Known Secondary structure										G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions