|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
I | L | H | P | S | L | A | S | A | N | P | L | H | Y | G | R | E | L | T | A | L | D | N | L | D | F | G | S | L | H | L | D | I | E | D | S | S | F | I | N | N | I | T | F | G | M | K | T | V | Q | A | V | A | R | Q | T | . |
P | H | P | L | S | F | H | F | M | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R |
Query Conservation |   |
  |
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   | . |   |   |
|   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |
Template Sequence |   |
K | I | I | V | S | L | M | G | R | D | I | N | S | V | K | A | E | A | L | A | Y | R | E | A | T | F | D | I | L | E | W | R | V | D | H | F | M | D | I | A | S | T | Q | S | V | L | T | A | A | R | V | I | R | D | A | M | P | D | I | P | L | L | F | T | F | R | S | A | K | E | G | G | E | Q | T | I | T | T | Q | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| S |  |  |  |  |  | G | G | G |
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
|
| B | G | G | G | T |
| S | B |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
. | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Q | R | W | F | N | A | L | A | E | I | R | . |
P | A | W | I | F | V | . |
H | A | E | T | L | D | Y | P | S | E | T | L | T | E | I | R | H | T | G | A | R | A | G | L | V | F | N | P | A | T | P | . |
. |
. |
I | D | A | W | R | Y | L | A | S | E | L | D | G | V | M | . |
. |
V | M | T | S | E | P | D | G | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
| . |
|
|   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |
Template Sequence |   |
Y | L | T | L | N | R | A | A | I | D | S | G | L | V | D | M | I | D | L | E | L | F | T | G | D | A | D | V | K | A | T | V | D | Y | A | H | A | H | N | V | Y | V | V | M | S | N | H | D | F | H | Q | T | P | S | A | E | E | M | V | S | R | L | R | K | M | Q | A | L | G | A | D | I | P | K | I | A | V | M | P | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | R | F | I | P | S | M | C | E | K | I | Q | K | V | R | T | A | F | P | Q | T | E | C | W | A | D | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
S | K | H | D | V | L | T | L | L | T | A | T | L | E | M | Q | Q | H | Y | A | D | R | P | V | I | T | M | S |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |