Job Description P39362 Confidence 94.03% Date Thu Jan 5 11:59:53 GMT 2012 Rank 353 Aligned Residues 200 % Identity 14% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.								.	.	.																													.	.	.	.
Query SS confidence																														.	.	.								.	.	.																													.	.	.	.
Query Sequence		A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	.	.	.	D	S	S	F	I	N	N	.	.	.	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	.	.	.	.	Q	R	W	F	N	A	L
Query Conservation																														.	.	.								.	.	.																													.	.	.	.
Alig confidence																									.	.				.	.	.								.	.	.																													.	.	.	.
Template Conservation																									.	.
Template Sequence		L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	.	.	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	V	A	E	A	I	Y	K	A	Q	A	E	T	G	E	V	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	M	K	R	A	V	A
Template Known Secondary structure		S																	T	T		S	B		.	.			T	T		S	S	B	T	T	B																					S	S			B								S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure												.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	R	P	A	W	I	F	V	.	.	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	.	.	.	.	.	.	.	.	.	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F
Query Conservation												.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G
Template Known Secondary structure		T	T	T	T		S																									T								T	T						S		S	S	S	S																S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.																			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.		200	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Query Sequence		I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	.	A	A	G	A	Q	H	M	V	I	G	.	R	A	L	F	S	S	S	D	.	Y	R	A	T	L	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.									.
Template Conservation
Template Sequence		E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	A	C	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	A
Template Known Secondary structure																S					B	G	G	G	T	B		S															S	S			G	G	G										S	S	S					S					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		206	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions