Job Description P39362 Confidence 99.93% Date Thu Jan 5 11:59:53 GMT 2012 Rank 20 Aligned Residues 198 % Identity 18% Template d1geqa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																					.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure												.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	P	S	L	A	S	A	N	P	.	.	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	V	Q	A	V	A	R	Q	T	P	H	P
Query Conservation												.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.													.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.										.	.	.
Template Sequence		L	I	P	Y	L	T	A	G	D	P	D	K	Q	S	T	L	N	F	L	L	A	L	D	E	.	Y	A	G	A	I	E	L	G	I	.	.	.	P	F	S	D	P	I	A	D	G	K	T	I	Q	E	S	H	Y	R	A	L	K	N	G	F	K	L	R	E	A	F	W	I	V	K	E	F	R	R	H	S	S	T	P
Template Known Secondary structure								T	T	S	S													G	G	.	G	B	S							.	.	.			S			T	T	S														T	T															T	T
Template Predicted Secondary structure																										.										.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		61	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		L	S	F	H	F	M	L	A	.	.	.	.	.	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		I	V	L	M	T	Y	Y	N	P	I	Y	R	A	G	V	R	N	F	L	A	E	A	K	A	S	G	V	D	G	I	L	V	V	D	L	P	V	F	H	A	K	E	F	T	E	I	A	R	E	E	G	I	K	T	V	F	L	A	A	P	N	T	P	D	E	R	L	K	V	I	D	D	M	T	T	G	F	V	Y	L
Template Known Secondary structure																											T							T	T			G	G	G												T									T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																							.																									.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																									.	.	.	.	.	.	.	.	.
Query Sequence		T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	.	.	.	.	.	.	.	.	.	S	S	D	Y	R	A	T	L	A
Query Conservation																																							.																									.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.														.											.																									.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.														.
Template Sequence		V	S	L	Y	E	I	P	K	.	.	.	.	.	T	A	Y	D	L	L	R	R	A	K	R	I	C	.	R	N	K	V	A	V	G	F	G	V	S	K	R	E	H	V	V	S	L	L	K	E	G	A	N	G	V	V	V	G	S	A	L	V	K	I	I	G	E	K	G	R	E	A	T	E	F	L	K	K	K	V	E
Template Known Secondary structure										.	.	.	.	.														.	S	S						S				S										T	T		S																G	G	G
Template Predicted Secondary structure										.	.	.	.	.														.
Template SS confidence
		163	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		206	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	G	I
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions