Return to main results Retrieve Phyre Job Id

Job DescriptionP39362
Confidence99.22%DateThu Jan 5 11:59:53 GMT 2012
Rank88Aligned Residues182
% Identity16%Templated1dqwa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20......... 30.........40.........50.........60.........70.........
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Query Sequence  HPSLASANPLHYGRELTALDNLDFGS. . . . LHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAE
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Template Sequence  TNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGT. . . VKPLKALSAKYNFLLFEDRKFADIGNTVKLQYS
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SSGGG
S
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TTTT...T



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   30.........40.........50.........60.........70... ......80.........90.........100......
 
   80. ........90. ........100.........110.........120.........130.........140.........150.
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Query Sequence  IR. . . . . . . PAWIFVHAET. LDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMC
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Template Sequence  AGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKE. . . . . . . . . . . . . . . . . . . . . PRGLLMLAELSCKGSLSTGEYT
Template Known Secondary structure  STTT

SSTT
T
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S

STT



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   107..110.........120.........130.........140... ......150.........160.....
 
   152.......160... ......170..... ....180.........190..... ....200.
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Query Sequence  EKIQKVRTAFPQ. . . . . . . . . . . . . . . . . . TECWADGGITLA. . . . . . . . . . . AAQQLAAAGAQHMVIGRALF. SSSDYR
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Template Sequence  KGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRDAK
Template Known Secondary structure  TT
TTT
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TTTT



SB
SSTTT
STTT

B
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GGGTSTT

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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   202.......
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Query Sequence  ATLAQFAT
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Template Sequence  VEGERYRK
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   246...250...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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