Job Description P39362 Confidence 98.34% Date Thu Jan 5 11:59:53 GMT 2012 Rank 170 Aligned Residues 136 % Identity 17% Template d1aw1a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																.			.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																.			.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	H	A	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	.	.	.	.	.	.	.	.	.	.	.	W	R	Y	L	A	S	E	L	D	G	.	.	.
Query Conservation																.			.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence																.			.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		P	A	M	L	K	E	F	G	A	T	H	I	I	I	G	H	S	E	R	R	E	Y	H	A	E	S	D	E	F	V	A	K	K	F	A	F	L	K	E	N	G	L	T	P	V	L	C	I	G	E	S	D	A	Q	N	E	A	G	E	T	M	A	V	C	A	R	Q	L	D	A	V	I	N	T	Q	G	V	E	A	L
Template Known Secondary structure						G	G	G	T							S								S																		T																T	T																			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
						132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	.	.	.	.	.	.	.	.	.	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	.	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		E	G	A	I	I	A	Y	E	P	I	W	A	I	G	T	G	K	A	A	T	A	E	D	A	Q	R	I	H	A	Q	I	R	A	H	I	A	E	K	S	E	A	V	A	K	N	V	V	I	Q	Y	G	G	S	V	K	P	E	N	A	A	A	Y	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	A	L	D	A
Template Known Secondary structure		T	T								G	G	G	T	T	T	S																					T	T														S				T	T	T						T	S	T	T							S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		198	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	F	A	A	I	A	K	A	A	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions