Job Description P39362 Confidence 99.83% Date Thu Jan 5 11:59:53 GMT 2012 Rank 47 Aligned Residues 199 % Identity 14% Template c3tfxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5'-phosphate decarboxylase from2 lactobacillus acidophilus Resolution 2.19 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																					.	.	.	.
Query SS confidence																								.	.	.																																					.	.	.	.
Query Sequence		P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	.	.	.	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	.	.	.	.	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L
Query Conservation																								.	.	.																																					.	.	.	.
Alig confidence																								.	.	.							.	.	.	.	.																				.						.	.	.	.
Template Conservation																																	.	.	.	.	.																				.
Template Sequence		P	V	I	V	A	L	D	L	D	N	E	E	Q	L	N	K	I	L	S	K	L	G	D	P	H	D	V	F	V	K	V	.	.	.	.	.	G	X	E	L	F	Y	N	A	G	I	D	V	I	K	K	L	T	Q	Q	.	G	Y	K	I	F	L	D	L	K	X	H	D	I	P	N	T	V	Y	N	G	A	K	A	L
Template Known Secondary structure										S	S										T	T			G	G	G						.	.	.	.	.						T	T	S		T										.	T											S
Template Predicted Secondary structure																																	.	.	.	.	.																				.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																.																		.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence																.																		.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		A	E	I	R	P	A	W	I	F	V	H	A	E	T	.	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	.	.	.	.	.	.	.	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	.	.	.	.	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R
Query Conservation																.																		.	.	.	.	.	.	.																								.	.	.	.
Alig confidence																.																		.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		A	K	L	G	I	T	F	T	T	V	H	A	L	G	G	S	Q	X	I	K	S	A	K	D	G	L	I	A	G	T	P	A	G	H	S	V	P	K	L	L	A	V	T	E	L	T	S	I	S	D	D	V	L	R	N	E	Q	N	C	R	L	P	X	A	E	Q	V	L	S	L	A	K	X	A	K	H	S	G	A	D
Template Known Secondary structure			T	T	T		S						G	G	G																		T	T											S		T	T									T	S			S	S																T	T		S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	I	C	S	P	L	E	V	K	K	L	H	E	N	I	G	D	D	F	L	Y	V	T	P	G	I	R	P	A	T	P	K	X	A	K	E	W	G	S	S	A	I	V	V	G	R	P	I	T	L	A	S	D	P	K	A	A	Y	E	A	I	K	K
Template Known Secondary structure							T	T	T										S	S	S																		T	T		S										T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions