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Job DescriptionP39362
Confidence96.96%DateThu Jan 5 11:59:53 GMT 2012
Rank268Aligned Residues161
% Identity11%Templatec3r89A_
PDB info PDB header:lyaseChain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5-phosphate decarboxylase from2 anaerococcus prevotii dsm 20548
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.. .......70....... ..80.........90. ........100.........110.........
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Query Sequence  KTVQAVARQTPHPLS. . . FHFMLARPQRWFNAL. . AEIRPAWIFVHAET. LDYPSETLTEIRHTGARAGLVFNPATPI. .
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Template Sequence  DTLSYLREKDLLSIGDVKRSDIAASAKXYAKAHFEGDFETDFITLNPYXGXDSIEPYEEYIEKGDKGVFVLLRTSNPGAK
Template Known Secondary structure  TT




SGGG

S

TT
GGGTGGGTTS


SGGGG
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   120.........130.........140.........150.........160.........170.. .......180...
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Query Sequence  . . . . . . . . . . . . . DAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWADGGI. TLAAAQQLAAA. .
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Template Sequence  DFEVLPVDGEEFFYKVGDKXRELNEKYIGKSGFGPIGLVVGATHSEEVEKIRKRYDKXFFLIPGFGAQKADSXNVYKLLE
Template Known Secondary structure  TTTT
TTTGGG

TTS




TTT



SSTT
B
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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   184.....190....... ..200........
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Query Sequence  . . GAQHMVIGRALFSS. . . . . SDYRATLAQFA
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Template Sequence  GLNGGVVNSSRAILKNWQNYEDGSEKVGYYAR
Template Known Secondary structure  TTBS
TGGGGSTTGGG
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   240.........250.........260.........270.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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