Job Description P39362 Confidence 98.31% Date Thu Jan 5 11:59:53 GMT 2012 Rank 175 Aligned Residues 154 % Identity 15% Template c3qw4B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:ump synthase; PDBTitle: structure of leishmania donovani ump synthase Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																					.	.	.	.	.																.
Query SS confidence													.	.																					.	.	.	.	.																.
Query Sequence		G	M	K	T	V	Q	A	V	A	R	Q	.	.	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	.	.	.	.	.	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	.	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T
Query Conservation													.	.																					.	.	.	.	.																.
Alig confidence													.	.																					.	.	.	.	.																.									.	.	.
Template Conservation																																																																.	.	.
Template Sequence		G	W	A	A	L	S	E	V	I	R	A	V	P	A	G	I	P	V	V	L	D	A	K	R	G	D	I	A	D	T	A	D	A	Y	A	T	S	A	F	K	H	L	N	A	H	A	I	T	A	S	P	Y	M	G	S	D	S	L	Q	P	F	M	.	.	.	R	Y	P	D	K	A	V	F	V	L	C	K	T	S	N
Template Known Secondary structure												T	S		T	T	S		B																						T	T	S			S						S	T	T										.	.	.	T		T	T	S									S	S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		118																	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Query Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	.	G	I	T	L	A	A	A	Q	Q	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.																																		.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		K	G	S	N	D	L	Q	C	L	R	V	G	D	R	Y	L	Y	E	A	V	A	E	R	A	E	G	P	W	N	.	.	.	.	.	.	.	V	N	G	N	V	G	L	V	V	G	A	T	D	P	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	P	G	I	G	A	Q	G	G	S	L	K	A	S
Template Known Secondary structure		G	G	G	G	G	T	T	T	S			T	T												T	T	T	T		.	.	.	.	.	.	.	T	T	S								T	T													S	S								S	S	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		181	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		A	A	A	G	A	Q	.	.	.	.	.	.	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	A	G	L	R	A	D	G	S	G	M	L	I	N	V	S	R	G	L	A	R	A	A	D	P	R	A	A	A	K	E	L	C	E
Template Known Secondary structure								T	T	S								S					S		S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions