Job Description P39362 Confidence 90.58% Date Thu Jan 5 11:59:53 GMT 2012 Rank 417 Aligned Residues 197 % Identity 17% Template c3qfwB_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris Resolution 1.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.
Predicted Secondary structure																																		.	.										.	.	.																											.	.	.	.
Query SS confidence																																		.	.										.	.	.																											.	.	.	.
Query Sequence		I	L	H	P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	.	.	I	E	D	S	S	F	I	N	N	.	.	.	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	.	.	.	.	R	P	Q	R
Query Conservation																																		.	.										.	.	.																											.	.	.	.
Alig confidence							.	.																										.	.										.	.	.																											.	.	.	.
Template Conservation							.	.
Template Sequence		A	L	K	P	Q	.	.	G	L	S	P	A	A	L	A	S	I	A	H	Q	L	A	L	G	G	V	D	L	I	K	D	D	H	G	L	A	D	Q	A	F	S	P	F	A	E	R	A	A	A	V	G	K	A	V	R	E	A	N	A	A	R	G	G	R	T	L	Y	A	P	N	I	S	G	T	L	D	D	M	R	R
Template Known Secondary structure						T	.	.	T	S															T	T		S						T	T		S	S		T	T	S																					T								B			S	S
Template Predicted Secondary structure							.	.
Template SS confidence
		137	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	.	.	.	.	.	.	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence																								.	.																					.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		Q	L	G	V	I	R	D	E	G	I	G	A	V	L	V	A	P	M	I	V	G	V	.	.	S	N	F	H	A	I	V	K	E	A	A	G	L	V	V	V	A	H	P	A	M	A	G	A	A	K	I	A	A	P	L	L	L	G	R	L	F	R	L	F	G	A	D	A	T	V	F	P	N	Y	G	G	R	F	A	Y
Template Known Secondary structure										T														.	.								T	T		T	T								T	T	T	T	S	S		B							T							T		S							T	T	S	S	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																	.
Query SS confidence																						.	.	.																	.
Query Sequence		F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	.	.	.	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	.	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation																						.	.	.																	.
Alig confidence																						.	.	.																	.											.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.
Template Sequence		S	T	A	S	C	L	A	L	A	Q	A	A	R	D	P	F	G	K	L	N	A	C	I	P	T	P	A	G	G	I	M	L	Q	R	V	N	E	L	L	R	F	Y	G	Q	D	V	M	L	L	I	.	.	.	.	.	.	.	R	L	T	E	Q	A	S	R	F	V	N
Template Known Secondary structure															S			T	T										S	S			T	T	T										S	S						.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions