Job Description P39362 Confidence 97.44% Date Thu Jan 5 11:59:53 GMT 2012 Rank 238 Aligned Residues 176 % Identity 13% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	L	H	P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I
Query Conservation
Alig confidence								.	.																									.	.	.	.									.																				.	.							.
Template Conservation								.	.																									.	.	.	.									.																				.	.							.
Template Sequence		I	I	A	G	P	S	.	.	V	E	G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	.	.	.	.	G	A	Y	K	L	G	E	K	.	G	L	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E	.	.	A	L	G	E	D	D	.	L	P	K	V	A	E	Y
Template Known Secondary structure								.	.																	T	T							.	.	.	.					.				.												T	T							.	.			S	G	G	G	.
Template Predicted Secondary structure								.	.																									.	.	.	.									.																				.	.							.
Template SS confidence
		97	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.		160	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																						.											.	.	.	.											.	.
Query SS confidence																																						.											.	.	.	.											.	.
Query Sequence		R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	T	P	I	D	A	W	R	Y	L	A	.	.	.	.	S	E	L	D	G	V	M	V	M	T	.	.	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K
Query Conservation																																						.											.	.	.	.											.	.
Alig confidence		.															.																					.											.	.	.	.											.	.														.
Template Conservation		.															.																																																													.
Template Sequence		.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	F	.	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	.	I	S	A
Template Known Secondary structure		.		S						G	G	G	T	T			.							G	G	G		S								T	T																T	T											B			S		S	S	S	S	S	B			.	T	T
Template Predicted Secondary structure		.															.																																																													.
Template SS confidence
			178	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	.	.	.	.	.	.	.	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I
Query Conservation																						.	.	.	.	.	.	.
Alig confidence										.												.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		V	P	I	I	R	K	E	S	.	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V
Template Known Secondary structure									B	.	S	S						T	T	T	T	T			G	G	G												T		S
Template Predicted Secondary structure										.
Template SS confidence
		255	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions