Job Description P39362 Confidence 93.21% Date Thu Jan 5 11:59:53 GMT 2012 Rank 370 Aligned Residues 184 % Identity 10% Template c3noeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.	.	.	.																	.	.	.
Query SS confidence																																																	.	.	.	.	.	.																	.	.	.
Query Sequence		N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	F	N	A	L	A	E	I	R
Query Conservation																																																	.	.	.	.	.	.																	.	.	.
Alig confidence																						.	.	.																									.	.	.	.	.	.																	.	.	.
Template Conservation																						.	.	.
Template Sequence		D	W	D	S	L	A	K	L	V	D	F	H	L	Q	D	G	T	N	A	I	.	.	.	V	A	V	G	T	T	G	E	S	A	T	L	D	V	E	E	H	I	Q	V	V	R	R	V	V	D	Q	V	K	G	R	I	P	V	I	A	G	T	G	A	N	S	T	R	E	A	V	A	L	T	E	A	A	K	S	G	G
Template Known Secondary structure																	T		S			.	.	.			S	S	T	T	T	T	G	G	G																		T	T	S	S									S	S													T	T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		82	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		P	A	W	I	F	V	H	A	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	.	.	.	.	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M
Query Conservation										.	.	.	.	.	.																												.	.	.	.	.
Alig confidence										.	.	.	.	.	.																												.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	C	L	L	V	T	P	Y	Y	N	K	P	T	Q	E	G	M	Y	Q	H	F	R	H	I	A	E	A	V	A	I	P	Q	I	L	Y	N	V	P	G	R	T	S	C	D	M	L	P	E	T	V	E	R	L	S	K	V	P	N	I	I	G	I	K	E	A	T	G	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S									S	S																		S		S												S													T	S	T	T								S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		L	Q	R	A	K	E	V	I	E	R	V	G	K	D	F	L	V	Y	S	G	.	.	D	D	A	T	A	V	E	L	M	L	L	G	G	K	G	N	I	S	V	T	A	N	V	A	P	R	A	M	S	D	L	C	A	A	A	M	R
Template Known Secondary structure												S		T	T	S						.	.		T	T	T							T	T							S	G	G	G	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions