Job Description P39362 Confidence 96.84% Date Thu Jan 5 11:59:53 GMT 2012 Rank 275 Aligned Residues 166 % Identity 14% Template c3ngjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica Resolution 1.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70										.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.														.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.														.	.	.	.	.	.	.	.	.
Query Sequence		A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	P	H	P	L	S	F	H	F	M	L	A	R	P	.	.	.	.	.	.	.	.	.	Q	R	W	F	N	A	L	A	E
Query Conservation																																																		.														.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.													.														.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	E	E	Q	I	R	K	L	C	S	E	A	A	E	Y	K	F	A	S	V	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	T	W	V	P	L	C	A	E	L	L	K	G	T	G	V	K	V	C	T	V	I	G	F	P	L	G	A	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E
Template Known Secondary structure																		T		S					.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G								T	T	T	S	S								S	T	T	T			S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.														.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query Sequence		I	R	P	A	W	I	F	V	H	A	.	.	.	.	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	.	.	.	.	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.							.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		Q	G	A	E	E	V	D	M	V	I	N	I	G	M	V	K	A	K	K	Y	D	D	V	E	K	D	V	K	A	V	V	D	A	S	G	K	A	L	T	K	V	I	I	E	C	C	Y	L	T	N	E	E	K	V	E	V	C	K	R	C	V	A	A	G	A	E	Y	V	.	.	.	.	.	.	K	T	S	T	G	F
Template Known Secondary structure		T	T		S													T	T																	T	T	S								G	G	G	S																T		S			.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																				.											.
Query SS confidence																				.											.
Query Sequence		R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	.	Q	T	E	C	W	A	D	G	G	I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L
Query Conservation																				.											.
Alig confidence																				.											.
Template Conservation
Template Sequence		G	T	H	G	A	T	P	E	D	V	K	L	M	K	D	T	V	G	D	K	A	L	V	K	A	A	G	G	I	R	T	F	D	D	A	M	K	M	I	N	N	G	A	S	R	I	G	A	S	A	G	I
Template Known Secondary structure		S	S																T	T	S	S						S	S			S										T	T							S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions