Job Description P39362 Confidence 95.50% Date Thu Jan 5 11:59:53 GMT 2012 Rank 315 Aligned Residues 165 % Identity 18% Template c3ng3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde Resolution 2.15 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																						.	.	.	.													.	.	.
Query SS confidence																																																						.	.	.	.													.	.	.
Query Sequence		A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	.	.	.	.	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	F	N	A	L	A	E	I	R	P
Query Conservation																																																						.	.	.	.													.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.											.						.	.	.	.													.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		A	T	A	A	D	V	A	A	L	V	T	E	A	A	E	L	G	V	Y	A	V	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	P	M	V	P	A	A	V	Q	.	A	G	A	R	V	A	S	V	A	G	F	P	S	G	K	H	V	S	A	V	K	A	H	E	A	A	L	A	V	A	S	G	A
Template Known Secondary structure																		T		S					.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G							.	T									S	T	T	T			S															T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.										.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.										.	.	.	.
Query Sequence		A	W	I	F	V	H	A	.	.	.	.	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	.	.	.	.	P	I	D	A	W	R	Y	L	A	.	.	.	.	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.										.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.										.	.	.	.							.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		A	E	I	D	M	V	I	D	V	G	A	A	L	A	G	D	L	D	G	V	R	A	D	I	A	A	V	R	G	A	V	G	G	A	V	L	K	V	I	V	E	S	S	A	L	L	A	L	A	D	E	H	T	L	V	R	V	C	R	A	A	E	D	A	G	A	D	F	V	.	.	.	.	.	.	K	T	S	T	G
Template Known Secondary structure		S													T	T																	T	T	S															S															T	T		S			.	.	.	.	.	.					S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.
		144		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure			.																			.											.
Query SS confidence			.																			.											.
Query Sequence		Q	.	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	.	Q	T	E	C	W	A	D	G	G	I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L
Query Conservation			.																			.											.
Alig confidence			.																			.											.
Template Conservation
Template Sequence		F	H	P	S	G	G	A	S	V	R	A	V	A	L	M	A	E	A	V	G	G	R	L	G	V	K	A	S	G	G	I	R	T	A	A	D	A	L	A	M	L	D	A	G	A	T	R	L	G	L	S	G	T	R
Template Known Secondary structure				T	T		S														T	T	S	S						S	S			S										T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions