Job Description P39362 Confidence 92.68% Date Thu Jan 5 11:59:53 GMT 2012 Rank 384 Aligned Residues 183 % Identity 9% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80
Predicted Secondary structure																																																	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.																	.	.	.
Query Sequence		N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	.	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	F	N	A	L	A	E	I
Query Conservation																																																	.	.	.	.	.	.	.																	.	.	.
Alig confidence																						.	.	.																									.	.	.	.	.	.	.																	.	.	.
Template Conservation																						.	.	.
Template Sequence		D	E	Q	S	Y	A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	.	.	.	V	P	V	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A	G	S	N	A	T	H	E	A	V	G	L	A	K	F	A	K	E	H
Template Known Secondary structure															T	T	T					.	.	.		T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S										S	S														T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		R	P	A	W	I	F	V	H	A	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	.	.	.	.	.	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S
Query Conservation											.	.	.	.	.	.																							.	.	.	.	.
Alig confidence											.	.	.	.	.	.																							.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D	T	I	I	K	L	F	R	D	C	E	N	I	Y	G	V	E	A	S	G	N	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S									S	S																			S	S												S																T	T							S	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence		.																						.	.	.
Template Conservation		.																						.	.	.
Template Sequence		.	I	D	K	C	V	D	L	L	A	H	E	P	R	X	X	L	I	S	G	E	D	.	.	.	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S	N	L	L	P	D	X	I	S	A	L	T	H	F	A	L	D
Template Known Secondary structure		.												T	T	S	B						G	.	.	.	G	G							T	T							S	G	G	G	T														T
Template Predicted Secondary structure		.																						.	.	.
Template SS confidence
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions