Job Description P39362 Confidence 99.77% Date Thu Jan 5 11:59:53 GMT 2012 Rank 60 Aligned Residues 198 % Identity 16% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.	.																															.											.	.
Query SS confidence																						.	.																															.											.	.
Query Sequence		L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	.	.	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	.	T	P	H	P	L	S	F	H	F	M	.	.	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R
Query Conservation																						.	.																															.											.	.
Alig confidence																						.	.							.	.	.	.	.																				.											.	.
Template Conservation																														.	.	.	.	.
Template Sequence		I	V	A	L	D	Y	D	N	L	A	D	A	L	A	F	V	D	K	I	D	P	S	T	C	R	L	K	V	.	.	.	.	.	G	K	E	M	F	T	L	F	G	P	D	F	V	R	E	L	H	K	R	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A	A	E	L	G
Template Known Secondary structure								S										T	T	S		T	T	S						.	.	.	.	.																			T	T											S																T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure												.																		.	.	.	.																					.	.	.
Query SS confidence												.																		.	.	.	.																					.	.	.
Query Sequence		P	A	W	I	F	V	H	A	E	T	.	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	.	.	.	.	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	.	.	.	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K
Query Conservation												.																		.	.	.	.																					.	.	.
Alig confidence												.																		.	.	.	.																					.	.	.
Template Conservation
Template Sequence		V	W	M	V	N	V	H	A	S	G	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E	S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D	G	V	V	C	S	A	Q	E
Template Known Secondary structure			S						G	G	G													G	G	G	G	G	G	S								S		T	T									T	T			S																T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	.	.	.	.	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	P	A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G	S	D	Y	L	V	I	G	R	P	I	T	Q	A	A	H	P	E	V	V	L	E	E	I	N	S
Template Known Secondary structure											T	T	S												T	T	S										T		S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions