Job Description P39362 Confidence 90.65% Date Thu Jan 5 11:59:53 GMT 2012 Rank 416 Aligned Residues 169 % Identity 12% Template c3lciA_ PDB info PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w Resolution 2.12 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.																	.	.	.
Query SS confidence																																																			.	.	.	.	.	.																	.	.	.
Query Sequence		S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	F	N	A	L	A	E
Query Conservation																																																			.	.	.	.	.	.																	.	.	.
Alig confidence																								.	.	.																									.	.	.	.	.	.																	.	.	.
Template Conservation																								.	.	.
Template Sequence		A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	.	.	.	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R
Template Known Secondary structure			B															T	T		S			.	.	.			S	S	G	G	G	T	G	G	G	S																	T	T	T	S									S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																	.												.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																	.												.	.	.	.	.
Query Sequence		I	R	P	A	W	I	F	V	H	.	.	.	.	.	.	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	.	T	G	A	R	A	G	L	V	F	N	P	.	.	.	.	.	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I
Query Conservation											.	.	.	.	.	.																	.												.	.	.	.	.
Alig confidence											.	.	.	.	.	.																	.												.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	L	P	G	V	G	A	L	K	Q	T	S	G	D	.	.	.	.	.	.	.
Template Known Secondary structure			T		S									S	S																		T	T	T																										T	S	T	T											.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A
Query Conservation
Alig confidence		.	.	.																				.	.	.
Template Conservation		.	.	.																				.	.	.
Template Sequence		.	.	.	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	L	V	L	Y	N	G	.	.	.	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y
Template Known Secondary structure		.	.	.												T	T							.	.	.		G	G	G								T							T	T
Template Predicted Secondary structure		.	.	.																				.	.	.
Template SS confidence
					171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions