Job Description P39362 Confidence 95.85% Date Thu Jan 5 11:59:53 GMT 2012 Rank 307 Aligned Residues 199 % Identity 9% Template c3kwsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution Resolution 1.68 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		M	I	L	H	P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		L	K	L	S	F	Q	E	G	I	A	P	G	E	S	L	N	E	K	L	D	F	X	E	K	L	G	V	V	G	F	E	P	.	.	.	.	.	.	G	G	G	G	L	A	G	R	V	N	E	I	K	Q	A	L	N	G	R	N	I	K	V	S	A	I	C	A	G	F	K	G	F	I	L	S	T	D	P	A	I	R
Template Known Secondary structure								T	T	S	S			S	S											T	T							.	.	.	.	.	.	B	S	T	T													T	T	S	S												S		T	T	B	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
										72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120
Predicted Secondary structure		.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	.	.	.	.	.	.	N	P	A	T	P	I	D
Query Conservation		.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	C	X	D	T	X	K	E	I	I	A	A	A	G	E	L	G	S	T	G	V	I	I	V	P	A	F	N	G	Q	V	P	A	L	P	H	T	X	E	T	R	D	F	L	C	E	Q	F	N	E	X	G	T	F	A	A	Q	H	G	T	S	V	I	F	E	P	L	N	R	K	E	C	F	Y	L	R	Q	V	A
Template Known Secondary structure																		T	T		S						S			T	T			S	B			S	S																					T	T										T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.																.
Query Sequence		A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	.	.	.	.	.	.	.	.	.	.	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	.	A	A	G	A	Q	H	M	V
Query Conservation																																																.	.	.	.	.	.	.	.	.	.																.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		D	A	A	S	L	C	R	D	I	N	N	P	G	V	R	C	X	G	D	F	W	H	X	T	W	E	E	T	S	D	X	G	A	F	I	S	G	G	E	Y	L	Q	H	V	H	V	A	S	R	K	R	R	S	X	P	G	E	D	G	D	A	D	N	Y	I	N	G	F	K	G	L	K	X	I	G	Y	N	N	Y	V
Template Known Secondary structure													T	T															S										G	G	G									T	T	T	S	S	S	T	T	T	T	G	G	G													T	T			S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		S	F	E	.	C	G	C	Q	G	D	R	N	V	V	V	P	A
Template Known Secondary structure					.				S	S
Template Predicted Secondary structure					.
Template SS confidence
		285	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions