Job Description P39362 Confidence 97.20% Date Thu Jan 5 11:59:53 GMT 2012 Rank 252 Aligned Residues 78 % Identity 12% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F
Query Conservation
Alig confidence																												.	.	.	.	.	.	.						.	.																											.
Template Conservation																												.	.	.	.	.	.	.						.	.																											.
Template Sequence		L	F	M	I	D	S	S	A	Y	N	K	G	V	A	L	I	Q	K	V	Q	P	D	C	I	E	L	.	.	.	.	.	.	.	L	P	G	I	I	.	.	P	E	Q	V	Q	K	M	T	Q	K	L	H	I	P	V	I	A	G	G	L	I	E	T	S	E	Q	.	V	N	Q	V	I	A	S	G	A	I	A	V	T
Template Known Secondary structure						S																	S					.	.	.	.	.	.	.			T	T		.	.																			S	S			S				.						T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.						.	.																											.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.
		87	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	A	E	T	L	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	N	K	H	L	W	E
Template Known Secondary structure					G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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