Job Description P39362 Confidence 97.29% Date Thu Jan 5 11:59:53 GMT 2012 Rank 250 Aligned Residues 180 % Identity 9% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.
Predicted Secondary structure																																					.	.	.																																							.	.
Query SS confidence																																					.	.	.																																							.	.
Query Sequence		L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	.	.	.	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	.	.	I	R
Query Conservation																																					.	.	.																																							.	.
Alig confidence																													.								.	.	.																								.	.							.							.	.
Template Conservation																													.																																		.	.							.
Template Sequence		V	N	E	K	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	.	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	.	.	S	S	K	W	E	V	.	I	E	A	G	L	K	C	L	Q	G
Template Known Secondary structure				T	T															T	T		S						.				T	T	S															T						T	S						.	.		S					.									S	S
Template Predicted Secondary structure																													.																																		.	.							.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.
		82	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.						.	.
Predicted Secondary structure						.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence						.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		P	A	W	I	.	.	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	.	.	.	.	.	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	.	.	.	.	.	.	.	.	.	.	.	L	D	G	V	M	V	M	T	.	.	.	.	.	S	E
Query Conservation						.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence						.	.																														.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T
Template Known Secondary structure										S	T	T																T							S			T	T					S																			T				G	G	G											S	S
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.			.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																	.	.	.	.	.				.	.					.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.				.	.					.	.	.	.	.	.	.	.
Query Sequence		P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	.	.	.	.	.	G	G	I	.	.	T	L	A	A	.	.	.	.	.	.	.	.	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I
Query Conservation																																	.	.	.	.	.				.	.					.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.				.	.					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V
Template Known Secondary structure		S		G	G	G	T	T																S	T	T						B	G	G	G	G	G	G	G	G	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions