Job Description P39362 Confidence 89.78% Date Thu Jan 5 11:59:53 GMT 2012 Rank 430 Aligned Residues 190 % Identity 15% Template c3gk0H_ PDB info PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei Resolution 2.28 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D
Query Conservation
Alig confidence																									.	.	.	.																														.	.
Template Conservation																									.	.	.	.																														.	.
Template Sequence		D	P	V	R	A	A	L	A	A	E	D	A	G	A	D	A	I	T	L	H	L	R	E	.	.	.	.	D	R	R	H	I	V	D	A	D	V	R	T	L	R	P	R	V	K	T	R	M	N	L	E	C	A	V	T	P	.	.	E	M	L	D	I	A	C	E	I	R	P	H	D	A	C	L	V	P	E	K	R	S
Template Known Secondary structure													T	T		S								T	.	.	.	.	T		S	S	S									T	T	T		S	S								S	S		.	.												S								S	G	G
Template Predicted Secondary structure																									.	.	.	.																														.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
																	94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	.	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																									.
Template Conservation																																								.
Template Sequence		E	L	T	T	E	G	G	L	D	V	V	G	H	F	D	A	V	R	A	A	C	K	Q	L	A	D	A	G	V	R	V	S	L	F	I	D	P	D	.	E	A	Q	I	R	A	A	H	E	T	G	A	P	V	I	E	L	H	T	G	R	Y	A	D	A	H	D	A	A	E	Q	Q	R	E	F	E	R	I	A	T	G
Template Known Secondary structure		G	B		S	S		S	B		T	T	T	T														T	T									S		.													S														S
Template Predicted Secondary structure																																								.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		158	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure							.	.																							.													.	.	.
Query SS confidence							.	.																							.													.	.	.
Query Sequence		R	T	A	F	P	.	.	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	.	A	Q	H	M	V	I	G	R	A	L	F	S	.	.	.	S	S	D	Y	R	A	T	L	A	Q	F	A	T	L
Query Conservation							.	.																							.													.	.	.
Alig confidence							.	.																							.													.	.	.
Template Conservation
Template Sequence		V	D	A	G	I	A	L	G	L	K	V	N	A	G	H	G	L	H	Y	T	N	V	Q	A	I	A	A	L	P	G	I	A	E	L	N	I	G	H	A	I	V	A	H	A	V	F	V	G	W	D	N	A	V	R	E	M	K	A	I
Template Known Secondary structure								T	T							T	T			T	T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions