Job Description P39362 Confidence 80.47% Date Thu Jan 5 11:59:53 GMT 2012 Rank 478 Aligned Residues 178 % Identity 11% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																					.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	.	.	.	.	.	G	S	L	H	L	D	I	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	.	H	P	L	S	F	H	F
Query Conservation																					.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																					.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		X	G	N	V	E	H	G	V	A	L	I	R	A	I	R	E	S	C	Q	G	F	D	F	D	F	G	F	K	L	Q	Y	R	N	L	D	T	F	I	H	S	S	F	K	G	R	D	D	V	K	Y	V	K	R	F	E	E	T	R	L	Q	P	E	Q	X	Q	K	L	V	A	E	X	K	A	N	G	F	K	A	I	C
Template Known Secondary structure		T	T		S														T	T	T			S															S		G	G	G	T	T			S	S	S	S							T																	T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	.	.	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G
Query Conservation																																																													.	.
Alig confidence									.																								.																												.	.
Template Conservation									.																								.
Template Sequence		T	P	F	D	E	E	S	.	V	D	L	I	E	A	H	G	I	E	I	I	K	I	A	S	C	S	F	T	D	W	P	.	L	L	E	R	I	A	R	S	D	K	P	V	V	A	S	T	A	G	A	R	R	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	L	T	I	X	H	C	V	A	E	Y	P
Template Known Secondary structure					S				.							T	T								S	S	S	T	T				.							T	S		S							T	T															T	T	T												S	S
Template Predicted Secondary structure									.																								.
Template SS confidence
		97	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	.	.	.	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M
Query Conservation																													.	.	.
Alig confidence																													.	.	.
Template Conservation
Template Sequence		T	P	D	D	H	L	H	L	A	R	I	K	T	L	R	Q	Q	Y	A	G	V	R	I	G	Y	S	T	H	E	D	P	D	L	X	E	P	I	X	L	A	V	A	Q	G	A	T	V	F
Template Known Secondary structure				G	G	G			T	T										T	T	S										S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions