Job Description P39362 Confidence 93.77% Date Thu Jan 5 11:59:53 GMT 2012 Rank 358 Aligned Residues 188 % Identity 12% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.	.	.	.																	.	.	.
Query SS confidence																																																	.	.	.	.	.	.																	.	.	.
Query Sequence		N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	F	N	A	L	A	E	I	R
Query Conservation																																																	.	.	.	.	.	.																	.	.	.
Alig confidence																															.	.	.																.	.	.	.	.	.																	.	.	.
Template Conservation																															.	.	.
Template Sequence		D	L	A	S	Q	K	R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	L	A	N	F	S	E	Q	.	.	.	F	A	I	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	R	V	P	V	I	V	T	T	S	H	Y	S	T	Q	V	C	A	A	R	S	L	R	A	Q	Q	L	G
Template Known Secondary structure																T	T		S					S	S	G	G	G	T	G	.	.	.	G	G	S																	T	T	S	S									S															T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		82	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		P	A	W	I	F	V	H	A	.	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	.	.	.	.	.	.	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I
Query Conservation										.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																									.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	I	P	I	M	V	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A	R	M	A	R	E	I	E	Q	V	A	Y	F	K	I	E	T	P	G	.	.	.	.	.	.	.
Template Known Secondary structure			S							S		B	T	T	T	B																			S	S								G	G	G																S	T	T								S	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	.	.	.	.	.	.	.	.	.	.	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T	L
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	A	N	K	L	R	E	L	I	R	L	G	G	D	A	I	E	G	P	W	D	G	E	E	A	I	T	L	L	A	D	L	H	A	G	A	T	G	A	M	T	G	G	G	F	P	D	G	I	R	P	I	L	E	A	W	R	E	G	R	H	D	D	A	Y	A	R	Y	Q	A	W
Template Known Secondary structure		.	.													G	G	G								G	G	G	T	T							T	T								S	S														T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions