Job Description P39362 Confidence 81.27% Date Thu Jan 5 11:59:53 GMT 2012 Rank 475 Aligned Residues 97 % Identity 10% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	.	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q
Query Conservation																										.
Alig confidence																										.																		.	.															.	.	.	.	.	.	.
Template Conservation																																												.	.															.	.	.	.	.	.	.
Template Sequence		A	I	I	I	D	D	H	P	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	.	.	K	P	D	I	V	I	I	D	V	D	I	P	G	V	.	.	.	.	.	.	.	N	G	I	Q	V	L	E	T	L	R	K	R	Q	Y	S
Template Known Secondary structure																						T	T								S	S	S	T	T									.	.			S						T	T		S	S	S	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure																																												.	.															.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	I	I	I	V	S	A	K	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S
Template Known Secondary structure		S											S	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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