Job Description P39362 Confidence 97.38% Date Thu Jan 5 11:59:53 GMT 2012 Rank 242 Aligned Residues 185 % Identity 14% Template c3cwoX_ PDB info PDB header:de novo protein Chain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds Resolution 3.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S
Query Conservation
Alig confidence																					.	.	.	.						.
Template Conservation																					.	.	.	.						.
Template Sequence		E	A	V	E	K	Y	K	E	L	K	P	D	I	V	T	M	D	I	T	.	.	.	.	M	P	E	M	N	.	G	I	D	A	I	K	E	I	M	K	I	D	P	N	A	K	I	I	V	C	S	A	M	G	Q	Q	A	M	V	I	E	A	I	K	A	G	A	K	D	F	I	V	N	T	A	A	V	E	N	P	S
Template Known Secondary structure		T	T										S								.	.	.	.	S	T	T	S	S	.												S	S	S									S	S	T										T	T							S							T
Template Predicted Secondary structure																					.	.	.	.						.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																																																										.
Template Sequence		L	I	T	Q	I	A	Q	T	F	G	S	Q	A	V	V	V	A	I	D	A	K	R	V	D	G	E	F	M	V	F	T	Y	S	G	K	K	N	T	G	I	L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	D	.	T	E	M	I	R	F	V
Template Known Secondary structure											T	G	G	G										S	S	S							T	T	T	T																		T		S							T	T	T	T	T			S				.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	L	T	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	A	G	A	D	A	A	L	A	A	S	V	F	H	F	R	E	I	D	V	R	E	L	K	E	Y
Template Known Secondary structure		G	G	G			S						S				S											T		S					S					T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions