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Job DescriptionP39362
Confidence100.00%DateThu Jan 5 11:59:53 GMT 2012
Rank1Aligned Residues206
% Identity21%Templatec3cu2A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAEI
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Template Sequence  QKLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFP. . THCFKDVHLXVRNQLEVAKAVVAN
Template Known Secondary structure 

GGGS
GGGTT

BSSSSS
B
B
TTS
..TTS
S
T
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   13......20.........30.........40.........50.........60...... ...70.........80.........90
 
   81........90.........100.... .....110.........120.........130.........140.........150.
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Query Sequence  RPAWIFVHAETLDYPSETLTEIRH. . . . . . . . . TGARAGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMC
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Template Sequence  GANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELIL
Template Known Secondary structure  T
STT
TTSTT
TT

TTS
GGGGTTTTTT
SSTTTT

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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   152.......160... ......170.........180..... ....190.........200.........
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Query Sequence  EKIQKVRTAFPQ. . . . TECWADGGITLAAAQQLAAAGA. . QHMVIGRALFSSSDYRATLAQFAT
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Template Sequence  DRVIQVEKRLGNRRVEKLINIDGSXTLELAKYFKQGTHQIDWLVSGSALFS. GELKTNLKVWKS
Template Known Secondary structure  GGGGGG
SS

SSS




GGGGS.S
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   171........180.........190.........200.........210.........220. ........230...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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