Job Description P39362 Confidence 80.17% Date Thu Jan 5 11:59:53 GMT 2012 Rank 479 Aligned Residues 179 % Identity 10% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.												.									.
Query SS confidence																																					.	.												.									.
Query Sequence		P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	.	.	M	K	T	V	Q	A	V	A	R	Q	T	.	P	H	P	L	S	F	H	F	.	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V
Query Conservation																																					.	.												.									.
Alig confidence																																					.	.												.									.
Template Conservation
Template Sequence		V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	R	L	T	E	G	L	H	T	H	C	P	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R	G	G	X	L	P	L	K	P	D	X	A	S	L
Template Known Secondary structure																T											T	T	S																				S	T	T									T	T	T			G	G	G	G	G	T	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		88	.	90	.	.												.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Query Sequence		H	A	E	T	L	.	.	.	.	.	.	.	.	.	.	.	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	.	.	.	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation
Template Sequence		S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N	A	X	P	A	D	R	E	V	F	D	F
Template Known Secondary structure				S					S	S	S																				T								S	S													T	T		S		S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		154	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure											.													.	.
Query SS confidence											.													.	.
Query Sequence		I	Q	K	V	R	T	A	F	P	.	Q	T	E	C	W	A	D	G	G	I	T	L	.	.	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G
Query Conservation											.													.	.
Alig confidence											.													.	.													.
Template Conservation																																						.
Template Sequence		Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	I	G	A	N	Q	L	T	V	N	E	W	A	I	A	A	G	G	H	.	T	R	T	G
Template Known Secondary structure											T	T	S								T	T												T	T			.				S
Template Predicted Secondary structure																																						.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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