Job Description P39362 Confidence 96.91% Date Thu Jan 5 11:59:53 GMT 2012 Rank 272 Aligned Residues 176 % Identity 11% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	.	.	R	P	A	W
Query Conservation																																																																												.	.
Alig confidence																												.																																.	.							.								.	.
Template Conservation																												.																																.	.							.
Template Sequence		M	Q	K	G	N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	.	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	L	S	L	D	.	.	I	Q	N	V	D	L	.	T	E	R	A	L	R	A	Y	P	G	R	S	L
Template Known Secondary structure				T	T															T	T		S					.			S	S	G	G	G	S																T		S						.	.							.									S	S
Template Predicted Secondary structure																												.																																.	.							.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.										130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	.	.	.	.	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	.	.	.	.	.	.	.	.	.	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C
Query Conservation																																.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	S	A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	S	D	R	V	I	F	D	P	G	V	L	P	L	G	A	E	G	K	P	V	E	V	L
Template Known Secondary structure							S																							S		S	S	S				S																		T	T		T	T	S										G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.								.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.								.	.
Template Sequence		K	T	I	E	F	I	S	S	.	.	K	G	F	N	T	T	V	.	.	G	L	S	N	L	S	F	L	P	D	R	S	Y	Y	N	T	A	F	L	V	L	G	I	S	K	G	L	S	S	A	I	M
Template Known Secondary structure										.	.	T	T			B			.	.	B	G	G	G	T	T				S															T	T
Template Predicted Secondary structure										.	.								.	.
Template SS confidence
		490	.	.	.	.	.	.	.			.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions