Job Description P39362 Confidence 94.11% Date Thu Jan 5 11:59:53 GMT 2012 Rank 349 Aligned Residues 201 % Identity 10% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		H	P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	.	.	.	.	.	.	.	.	.	.	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																															.	.	.	.	.										.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		S	L	L	A	T	R	V	R	T	K	D	M	I	N	I	A	S	K	T	A	D	V	F	K	D	G	F	S	L	.	.	.	.	.	E	M	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	E	N	P	W	E	R	L	E	R	L	R	K	A	I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G
Template Known Secondary structure				S	T	T										T								T	T	T	S	S			.	.	.	.	.					T	T								T	S																	S	S							B	G	G	G	B	T	S
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.						.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
								68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.												.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	.	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	.	.	.	.	.	.	.	.	.	.	.	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E
Query Conservation		.	.	.	.	.	.																					.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	N	Y	P	D	N	V	I	H	K	F	V	Q	E	S	A	K	A	G	I	D	V	F	R	I	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	P	E	R	S	N	I	Y	T	L	E	Y	Y	V	K	L	A	K	E
Template Known Secondary structure		S	S																		T									T	T			G	G	G	G										T	T											S		T	T		T	T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																										.	.	.	.																								.	.	.	.
Query SS confidence																																										.	.	.	.																								.	.	.	.
Query Sequence		L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	.	.	.	.	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	.	.	.	.	R	A	L	F	S	S	S	D	Y
Query Conservation																																										.	.	.	.																								.	.	.	.
Alig confidence																																										.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		L	E	R	E	G	F	H	I	L	A	I	K	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V	D	I	I	D	T	A	V	A	S	M	S	G	L	T	S	Q	P	S	A
Template Known Secondary structure					T	T		S							T	T	S																T	T			S									T	T	S												T	T							B		G	G	G		S	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	L	Y	Y	A	L	N	G
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		811	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions