Job Description P39362 Confidence 85.30% Date Thu Jan 5 11:59:53 GMT 2012 Rank 460 Aligned Residues 167 % Identity 10% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.	.	.	.																.	.	.
Query SS confidence																																																	.	.	.	.	.	.																.	.	.
Query Sequence		N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	.	.	.	W	F	N	A	L	A	E	I	R
Query Conservation																																																	.	.	.	.	.	.																.	.	.
Alig confidence																						.	.	.																									.	.	.	.	.	.																.	.	.
Template Conservation																						.	.	.
Template Sequence		D	I	D	A	M	I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	.	.	.	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V	D	S	I	E	D	A	A	D	Q	S	A	E	A	L	N	A	G
Template Known Secondary structure																T	T		S			.	.	.			S	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G								S	S														T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure									.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.														.	.
Query SS confidence									.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.														.	.
Query Sequence		P	A	W	I	F	V	H	.	.	.	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	.	.	.	.	.	.	.	G	A	R	A	G	L	V	F	N	P	.	.	.	.	.	A	T	P	I	D	A	W	R	Y	L	A	S	E	.	.	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q
Query Conservation									.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.														.	.
Alig confidence									.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.														.	.													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L	V	G	R	L	K	A	A	F	P	G	I	V	T	G	V	K	D	S	S	G	N	.	.	.	.
Template Known Secondary structure			S									S	S		S																			T	T														S																T	T	T								S			.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A
Query Conservation
Alig confidence		.	.	.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.	.																				.	.	.
Template Sequence		.	.	.	.	.	.	W	S	H	T	E	R	L	L	K	E	H	G	D	L	A	I	L	I	G	.	.	.	D	E	R	D	L	A	R	G	V	R	L	G	G	Q	G	A	I	S	G	V	A
Template Known Secondary structure		.	.	.	.	.	.												T	T	S						.	.	.											T	T							S	G	G
Template Predicted Secondary structure		.	.	.	.	.	.																				.	.	.
Template SS confidence
								175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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