Job Description P39362 Confidence 98.08% Date Thu Jan 5 11:59:53 GMT 2012 Rank 207 Aligned Residues 139 % Identity 13% Template c3atyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin f2a synthase; PDBTitle: crystal structure of tcoye Resolution 1.70 Å

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		14	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.																		.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.
Predicted Secondary structure												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																.									.	.	.	.
Query SS confidence												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																.									.	.	.	.
Query Sequence		H	Y	G	R	E	L	T	A	L	D	.	N	L	D	F	G	S	L	H	L	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	S	S	F	I	N	N	.	.	.	.	.	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	P	H	P	L	S	F	H	F	.	.	.	.
Query Conservation												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																.									.	.	.	.
Alig confidence												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.																.									.	.	.	.
Template Conservation
Template Sequence		L	F	V	E	G	A	K	N	A	I	F	K	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	L	D	A	F	F	R	E	S	S	N	K	R	Q	S	G	P	Y	A	G	T	T	I	D	T	R	C	Q	L	I	Y	D	V	T	K	S	V	C	D	A	V	G	S	D	R	V	G	L	R	I	S	P	L	N
Template Known Secondary structure													T	S			S								T	T	S							S	T	T	T					S	S	T	T		T	T	S																					G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
											66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	H	G	M	I	D	S	N	P	E	A	L	T	K	H	L	C	K	K	I	E	P	L	S	L	A	Y	L	H	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G				S														G	G	G			S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	.	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q
Query Conservation																																																		.
Alig confidence		.	.	.	.	.																					.																							.
Template Conservation		.	.	.	.	.																					.
Template Sequence		.	.	.	.	.	R	G	D	M	V	N	Q	Q	I	G	D	V	V	A	W	V	R	G	S	Y	.	S	G	V	K	I	S	N	L	R	Y	D	F	E	E	A	D	Q	Q	I	R	E	G	K	V	D	A	V	A	F	G	A	K	F	I	A	N	P	D	L	V	E	R	A	Q	Q
Template Known Secondary structure		.	.	.	.	.		S		T	T	S												T	T		.		S						S	S												T	T	S		S					S							T	T
Template Predicted Secondary structure		.	.	.	.	.																					.
Template SS confidence
							287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions