Job Description P39362 Confidence 98.75% Date Thu Jan 5 11:59:53 GMT 2012 Rank 120 Aligned Residues 176 % Identity 16% Template c2zbtB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8 Resolution 1.65 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		R	E	L	T	A	L	D	N	L	D	F	G	S	L	.	.	.	.	.	.	.	.	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.													.	.	.																												.
Template Conservation																																				.	.	.																												.
Template Sequence		E	Q	A	V	I	A	E	E	A	G	A	V	A	V	M	A	L	E	R	V	P	A	D	I	R	A	Q	G	G	V	A	R	M	S	.	.	.	D	P	K	I	I	K	E	I	M	A	A	V	S	I	P	V	M	A	K	V	R	I	G	H	F	V	E	.	A	M	I	L	E	A	I	G	V	D	F	I	D	E	S
Template Known Secondary structure											T		S						S	S								T	T							.	.	.													S	S								T	T					.							T	T		S
Template Predicted Secondary structure																																				.	.	.																												.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		89								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure			.	.	.	.	.	.	.																																																																								.
Query SS confidence			.	.	.	.	.	.	.																																																																								.
Query Sequence		A	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	.
Query Conservation			.	.	.	.	.	.	.																																																																								.
Alig confidence			.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																										.	.	.	.																									.
Template Conservation																			.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		E	V	L	T	P	A	D	E	E	H	H	I	D	K	W	K	F	.	.	.	.	.	.	.	.	.	K	V	P	F	V	C	G	A	R	N	L	G	E	A	L	R	R	I	A	E	G	A	A	M	I	.	.	.	.	R	T	K	G	E	A	G	T	G	N	V	V	E	A	V	R	H	A	R	T	M	W	K	E	I
Template Known Secondary structure		T	T	S			S		S	S					G	G	G		.	.	.	.	.	.	.	.	.	S	S							S	S										T	T		S			.	.	.	.						S	S	S			T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
																																			161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	V	Q	S	L	R	E	D	E	L	M	A	Y	A	K	E	I	G	A	P	F	E	L	V	K	W	V	H	D	H	G	R	L	P	V	V	N	F	A	A	G	G	I	A	T	P	A	D	A	A	L	M	M	H	L	G	M	D	G	V	F	V	G	S	G	I	F	K	S	G	D	P	R	K	R	A	R	A	I
Template Known Secondary structure							S		G	G	G									T													S	S		S	S				B		S	S			S										T	T		S						G	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		208	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions