Job Description P39362 Confidence 97.04% Date Thu Jan 5 11:59:53 GMT 2012 Rank 260 Aligned Residues 176 % Identity 11% Template c2vkzH_ PDB info PDB header:transferase Chain: H: PDB Molecule:fatty acid synthase subunit beta; PDBTitle: structure of the cerulenin-inhibited fungal fatty acid2 synthase type i multienzyme complex Resolution 4.0 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.			.	.	.	.
Predicted Secondary structure																																													.	.																.	.	.	.	.	.									.	.
Query SS confidence																																													.	.																.	.	.	.	.	.									.	.
Query Sequence		G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	.	.	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	.	.	.	F	N	A	L	A	E	I	R	.	.	P	A	W	I
Query Conservation																																													.	.																.	.	.	.	.	.									.	.
Alig confidence														.	.	.																.													.	.																.	.	.	.	.	.									.	.
Template Conservation														.	.	.																.
Template Sequence		P	D	F	V	A	A	T	T	N	A	G	Y	.	.	.	T	I	E	L	A	G	G	G	Y	F	S	A	A	G	M	.	T	A	A	I	D	S	V	V	S	Q	I	E	K	G	S	T	F	G	I	N	L	I	Y	V	N	P	F	M	L	Q	W	G	I	P	L	I	K	E	L	R	S	K	G	Y	P	I	Q	F	L
Template Known Secondary structure											T	T		.	.	.						G	G	G			S					.											S		T	T									T	T		T	T															T	T		S
Template Predicted Secondary structure														.	.	.																.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.				.	.	.	.	620	.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																				.	.	.	.	.
Query SS confidence																																											.	.	.																				.	.	.	.	.
Query Sequence		F	V	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	.	.	.	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	.	.	.	.	.	F	I	P	S	M	C	E	K	I	Q	K	V
Query Conservation																																											.	.	.																				.	.	.	.	.
Alig confidence						.																				.																	.	.	.																				.	.	.	.	.
Template Conservation						.																				.
Template Sequence		T	I	G	A	.	G	V	P	S	L	E	V	A	S	E	Y	I	E	T	L	G	L	K	Y	.	L	G	L	K	P	G	S	I	D	A	I	S	Q	V	I	N	I	A	K	A	H	P	N	F	P	I	A	L	Q	W	T	G	G	R	G	G	G	H	H	S	F	E	D	A	H	T	P	M	L	Q	M	Y	S	K	I
Template Known Secondary structure					S	.	S														S			S		.							S														S	T	T	S									S	S		S					S			S	S
Template Predicted Secondary structure						.																				.
Template SS confidence
		680	.	.	.		.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.		.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	.	.	.	.	.	.	.	.	.	.	.	A	Q	H	M	V	I	G	R	A	L	F	S	S	S
Query Conservation																	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.													.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		R	R	.	H	P	N	I	M	L	I	F	G	S	G	F	G	S	A	D	D	T	Y	P	Y	L	T	G	E	W	S	T	K	F	D	Y	P	P	M	P	F	D	G	F	L	F	G	S	R	V	M	I	A	K
Template Known Secondary structure		T	T	.		T	T							S	S			S					T					T		G	G	G	G	G	T							S					S	G	G	G	T	T	S	T
Template Predicted Secondary structure				.
Template SS confidence
		758	.		760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions