Job Description P39362 Confidence 89.89% Date Thu Jan 5 11:59:53 GMT 2012 Rank 428 Aligned Residues 184 % Identity 11% Template c2vc6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound Resolution 1.95 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.	.	.	.									.	.	.
Query SS confidence																																																	.	.	.	.	.	.									.	.	.
Query Sequence		N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	P	H	P	L	S	F	H	F	.	.	.	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	I	R
Query Conservation																																																	.	.	.	.	.	.									.	.	.
Alig confidence																						.	.	.																									.	.	.	.	.	.									.	.	.
Template Conservation																						.	.	.
Template Sequence		D	E	V	A	L	H	D	L	V	E	W	Q	I	E	E	G	S	F	G	L	.	.	.	V	P	C	G	T	T	G	E	S	P	T	L	S	K	S	E	H	E	Q	V	V	E	I	T	I	K	T	A	N	G	R	V	P	V	I	A	G	A	G	S	N	S	T	A	E	A	I	A	F	V	R	H	A	Q	N	A	G
Template Known Secondary structure																T	T		S			.	.	.		T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S														T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure								.	.																.	.	.	.															.	.	.	.	.
Query SS confidence								.	.																.	.	.	.															.	.	.	.	.
Query Sequence		P	A	W	I	F	V	.	.	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	.	.	.	.	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	.	.	.	.	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M
Query Conservation								.	.																.	.	.	.															.	.	.	.	.
Alig confidence								.	.																.	.	.	.															.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.
Template Sequence		A	D	G	V	L	I	V	S	P	Y	Y	N	K	P	T	Q	E	G	I	Y	Q	H	F	K	A	I	D	A	A	S	T	I	P	I	I	V	Y	N	I	P	G	R	S	A	I	E	I	H	V	E	T	L	A	R	I	F	E	D	C	P	N	V	.	.	.	.	.	.	.	.	.	K	G	V	D	A	T	G	N	L
Template Known Secondary structure			S									S	S																			S	S												S																T	T		.	.	.	.	.	.	.	.	.						S			T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		L	R	P	S	L	E	R	M	A	C	G	E	D	F	N	L	L	T	G	.	.	.	E	D	G	T	A	L	G	Y	M	A	H	G	G	H	G	C	I	S	V	T	A	N	V	A	P	A	L	C	A	D	F	Q	Q	A	C	L	N
Template Known Secondary structure											S		T	T	S	B				S	.	.	.		G	G	G							T	T							S	G	G	G	T														T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions