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Job DescriptionP39362
Confidence97.21%DateThu Jan 5 11:59:53 GMT 2012
Rank251Aligned Residues176
% Identity13%Templatec2uvaI_
PDB info PDB header:transferaseChain: I: PDB Molecule:fatty acid synthase beta subunits; PDBTitle: crystal structure of fatty acid synthase from thermomyces2 lanuginosus at 3.1 angstrom resolution. this file contains3 the beta subunits of the fatty acid synthase. the entire4 crystal structure consists of one heterododecameric fatty5 acid synthase and is described in remark 400
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50........ .60.........70... ......80. ....
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Query Sequence  GRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTP. . HPLSFHFMLARPQRW. . . . . . FNALAEIR. . PAWI
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Template Sequence  WDFVAATMNAGY. . . HIELAGGGYYNAQKM. SDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGL
Template Known Secondary structure  TT
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GGG

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   615....620...... ...630.........640. ........650.........660.........670.........680.........690
 
   86...90.........100.........110.........120...... ...130.........140..... ....150.......
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Query Sequence  FVHAETLDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLA. . . SELDGVMVMTSEPDGQGQR. . . . . FIPSMCEKIQKV
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Template Sequence  TIGA. GVPSIEVANEYIQTLGIRH. ISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRI
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   691... .....700.........710... ......720.........730.........740.........750.........760........
 
   158.160.........170.. .......180.... .....190........
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Query Sequence  RTAFPQTECWADGGI. TLAAAQQLAAAG. . . . . . . . . . . AQHMVIGRALFSSS
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Template Sequence  RK. CSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAK
Template Known Secondary structure  T.STTSS

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GGGTTTS




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SGGGGGBT
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   769770 .........780.........790.........800.........810.........820
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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