Job Description P39362 Confidence 92.11% Date Thu Jan 5 11:59:53 GMT 2012 Rank 395 Aligned Residues 168 % Identity 14% Template c2rfgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution Resolution 1.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.	.	.	.																	.	.	.
Query SS confidence																																																	.	.	.	.	.	.																	.	.	.
Query Sequence		N	P	L	H	Y	G	R	E	L	T	A	L	D	N	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	.	.	.	.	.	.	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	F	N	A	L	A	E	I	R
Query Conservation																																																	.	.	.	.	.	.																	.	.	.
Alig confidence																						.	.	.																									.	.	.	.	.	.																	.	.	.
Template Conservation																						.	.	.
Template Sequence		D	E	K	A	L	A	G	L	V	D	W	Q	I	K	H	G	A	H	G	L	.	.	.	V	P	V	G	T	T	G	E	S	P	T	L	T	E	E	E	H	K	R	V	V	A	L	V	A	E	Q	A	Q	G	R	V	P	V	I	A	G	A	G	S	N	N	P	V	E	A	V	R	Y	A	Q	H	A	Q	Q	A	G
Template Known Secondary structure																T	T		S			.	.	.		T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S														T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure								.	.	.	.	.	.																														.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																														.	.	.	.	.
Query Sequence		P	A	W	I	F	V	.	.	.	.	.	.	H	A	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	.	.	.	.	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M
Query Conservation								.	.	.	.	.	.																														.	.	.	.	.
Alig confidence								.	.	.	.	.	.																														.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	V	L	C	V	A	G	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	M	V	H	D	A	I	D	I	P	I	I	V	Y	N	I	P	P	R	A	V	V	D	I	K	P	E	T	M	A	R	L	A	A	L	P	R	I	V	G	V	K	D	A	T	T	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S								T	T	T																			S	S												S													T	S	T	T								S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		L	A	R	I	S	R	E	R	M	L	I	N	K	P	F	S	F	L	S	G	.	.	D	D	M	T	A	I	A	Y	N	A	S	G	G	Q	G	C	I	S	V	S	A
Template Known Secondary structure		T	T							T	T			S							S	.	.		G	G	G							T	T							S	G	G
Template Predicted Secondary structure																						.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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