Job Description P39362 Confidence 98.51% Date Thu Jan 5 11:59:53 GMT 2012 Rank 145 Aligned Residues 131 % Identity 11% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		F	N	A	L	A	E	I	R	P	A	W	I	F	V	.	H	A	.	.	.	.	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	.	.	.	.	.	.	.	.	.	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	.	.	.	.	.
Query Conservation																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence																.			.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		S	K	H	L	E	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S	E	Q	L	E	N	I	D	L	N	Y	P	N	L
Template Known Secondary structure								T	T														T	S																	T	T																														T	T	S		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
			132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.																														.																							.
Query SS confidence		.																														.																							.
Query Sequence		.	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	.	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L	A	A	.	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A
Query Conservation		.																														.																							.
Alig confidence		.													.																	.																							.
Template Conservation															.
Template Sequence		V	V	A	Y	E	P	I	W	A	I	G	T	S	.	A	S	L	E	D	I	Y	L	T	H	G	F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	N	A	K	E	I	L	G	I	D	S	V	D	G	L	L	I	G	S	A	S	W	E	L	E	N	F	K	T	I	I	S
Template Known Secondary structure								G	G	G	T	T			.														T	T	T	S		T	T	S						S	S			T	T	T						T	S	T	T								G	G	G	G	S									T
Template Predicted Secondary structure															.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions