Job Description P39362 Confidence 99.67% Date Thu Jan 5 11:59:53 GMT 2012 Rank 70 Aligned Residues 176 % Identity 10% Template c2h6rG_ PDB info PDB header:isomerase Chain: G: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase (tim) from2 methanocaldococcus jannaschii Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.
Predicted Secondary structure																						.																																																		.	.	.	.	.	.
Query SS confidence																						.																																																		.	.	.	.	.	.
Query Sequence		P	S	L	A	S	A	N	P	L	H	Y	G	R	E	L	T	A	L	D	N	.	L	D	F	G	S	L	H	L	D	I	E	D	S	S	F	I	N	N	I	T	F	G	M	K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	.	.	.	.	.	.	F	N	A	L
Query Conservation																						.																																																		.	.	.	.	.	.
Alig confidence																						.							.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	S	I	G	N	R	G	L	E	I	A	K	I	A	E	K	V	S	E	E	S	G	I	T	I	G	.	.	.	.	.	.	.	.	.	.	.	.	V	A	P	Q	F	V	D	L	R	M	I	V	E	N	V	N	I	P	V	Y	A	Q	H	I	D	N	I	N	P	G	S	H	T	G	H	I	L	A	E	A	I
Template Known Secondary structure		G	G	G	S	T																							.	.	.	.	.	.	.	.	.	.	.	.					T	T	T										S		B			S				S			S	S	S		T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.		.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure												.			.	.	.
Query SS confidence												.			.	.	.
Query Sequence		A	E	I	R	P	A	W	I	F	V	.	H	A	.	.	.	E	T	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K
Query Conservation												.			.	.	.
Alig confidence												.			.	.	.																																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	C	G	C	K	G	T	L	I	N	H	S	E	K	R	M	L	L	A	D	I	E	A	V	I	N	K	C	K	N	L	G	L	E	T	I	V	C	T	N	N	I	N	T	S	K	A	V	A	A	L	.	.	S	P	D	C	I	A	V	E	P	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T
Template Known Secondary structure					T							S	B	T	T	B																		T								S	S	S	T	T					T	T	T	.	.			S									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.														.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	.	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		V	R	A	V	K	E	I	N	K	D	V	K	V	L	C	G	A	G	I	S	K	G	E	D	V	K	A	A	L	D	L	G	A	E	G	V	L	L	A	S	G	V	V	K	A	K	N	V	E	E	A	I	R	E	L
Template Known Secondary structure										S	S							S	S			S									T	T	T							S	T	T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions