Job Description P39362 Confidence 98.02% Date Thu Jan 5 11:59:53 GMT 2012 Rank 213 Aligned Residues 157 % Identity 10% Template c2fdsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine-monophosphate-decarboxylase; PDBTitle: crystal structure of plasmodium berghei orotidine 5'-2 monophosphate decarboxylase (ortholog of plasmodium3 falciparum pf10_0225) Resolution 1.72 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.													.															.	.	.
Query SS confidence																																		.	.	.	.	.													.															.	.	.
Query Sequence		K	T	V	Q	A	V	A	R	Q	T	P	H	P	L	S	F	H	F	M	L	A	R	P	Q	R	W	F	N	A	L	A	E	.	.	.	.	.	I	R	P	A	W	I	F	V	H	A	E	T	.	L	D	Y	P	S	E	T	L	T	E	I	R	H	T	.	.	.	G	A	R	A	G	L	V	F	N	P	A	T	P
Query Conservation																																		.	.	.	.	.													.															.	.	.
Alig confidence											.																							.	.	.	.	.													.															.	.	.
Template Conservation											.
Template Sequence		N	V	F	D	Y	L	N	S	M	.	N	I	P	T	M	L	D	M	K	I	N	D	I	G	N	T	V	K	N	Y	R	K	F	I	F	E	Y	L	K	S	D	S	C	T	I	N	V	Y	M	G	T	S	M	L	K	D	I	C	F	D	Y	E	K	N	K	Y	Y	S	A	Y	V	L	I	K	T	T	N	K	D	S
Template Known Secondary structure										T	.	T																									T	T	S			S							T	T		S	T	T					S			T	T	T	T												S	S	G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		123	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
																				119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T	S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	G	G	I	T	L	A	A	A	Q	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		F	I	F	Q	N	E	L	S	I	N	D	K	Q	A	Y	I	V	M	A	E	E	T	Q	K	M	A	T	D	L	K	I	.	.	.	.	D	Q	N	N	E	F	I	G	F	V	V	G	S	N	A	F	E	E	M	K	I	I	R	N	K	F	P	D	S	Y	I	L	S	P	G	I	D	L	Y	K	T	L	K	N	G
Template Known Secondary structure						T	T				T	T																			T	T	.	.	.	.	G	G	G	T									T	T												S	T	T
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		181			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		A	.	.	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S	D	Y	R	A	T	L	A	Q	F	A	T
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		Y	N	K	D	Y	E	K	L	L	I	N	V	G	R	A	I	T	K	S	P	N	P	K	K	S	S	E	S	Y	Y	N
Template Known Secondary structure				S	S	G	G	G											T	S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions