Job Description P39362 Confidence 78.30% Date Thu Jan 5 11:59:53 GMT 2012 Rank 490 Aligned Residues 116 % Identity 9% Template c2egwB_ PDB info PDB header:rna methyltransferase Chain: B: PDB Molecule:upf0088 protein aq_165; PDBTitle: crystal structure of rrna methyltransferase with sah ligand Resolution 2.80 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.														.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	R	W	F	N	A	L	A	E	I	R	P	A	W	I	F	V	H	A	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	P	S	E	T	L	T	E	I	R	H	T	G	A	R	A	G	L	V	F	N	P	A	T	P	I	D	A	W	R	Y	L	A	S	E	L	D	G	V	M	V	M	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		M	D	T	I	V	R	Q	A	T	E	L	G	V	L	T	F	V	P	I	I	S	E	R	S	F	Q	K	E	E	A	I	L	K	K	T	E	K	W	K	R	I	V	I	E	A	M	K	Q	S	R	R	P	I	P	M	E	I	K	K	P	V	R	L	S	.	.	.	D	L	I	P	E	S	E	E	N	I	I	L	D
Template Known Secondary structure												T	T										T	T	S																									T	T			S										G	G	.	.	.	G					S	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		S	E	P	D	G	Q	G	Q	R	F	I	P	S	M	C	E	K	I	Q	K	V	R	T	A	F	P	Q	T	E	C	W	A	D	.	.	G	G	I	T	L	A	A	A	Q	Q	L	A	A	A	G	A	Q	H	M	V	I	G	R	A	L	F	S	S	S
Query Conservation																																			.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	Y	E	G	V	K	P	K	D	V	N	.	.	.	.	.	.	.	.	.	.	L	E	A	K	T	Y	S	V	V	V	G	P	E	G	G	F	S	K	R	E	S	Q	I	L	R	E	K	G	F	K	S	V	L	L	E	P	Y	T	L	R	T	E
Template Known Secondary structure		S	S	S			B		G	G	G	S		.	.	.	.	.	.	.	.	.	.	T	T		S									T	T													T	T							S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions